
Research Topic:
Methods for data integration in computational biology
Publications
Journal papers
- Integration of single-cell RNA-seq data into metabolic models to characterize
tumour cell populations. (2019)
Damiani, C., Maspero, D., Di Filippo, M., Colombo, R., Pescini, D., Graudenzi, A.,
Westerhoff, H. V., Alberghina, L., Vanoni, M., & Mauri, G
PLOS computational biology – doi:10.1371/journal.pcbi.1006733
- Integration of transcriptomic data and metabolic networks in cancer samples
reveals highly significant prognostic power. (2018)
Graudenzi, A*., Maspero, D*., Di Filippo, M., Gnugnoli, M., Isella, C., Mauri, G.,
Medico, E., Antoniotti, M., & Damiani, C
Journal of biomedical informatics, doi:10.1016/j.jbi.2018.09.010.
- popFBA: tackling intratumour heterogeneity with Flux Balance Analysis. (2017)
Damiani, C., Di Filippo, M., Pescini, D., Maspero, D., Colombo, R., & Mauri, G.,
Bioinformatics, doi:10.1093/bioinformatics/btx251
Conference proceedings
- Modeling spatio-temporal dynamics of metabolic networks with cellular automata
and constraint-based methods (2018)
Graudenzi, A., Maspero, D*. & Damiani, C.,
Lecture Notes in Computer Science – Proceedings of ACRI 2018, Accepted.*equal contributor
Teaching
Invited lectures
- System Biology – master’s degree in Industrial biotechnology – 1h
a.a. 2017/18
- Informatica per le scienze della terra – degree in Earth science – 4h
a.a. 2017/18
- Biologia computazionale – master’s degree in Computer science – 2h
a.a. 2017/18
Tutoring
- Informatica per la finanza – master’s degree in Economics and finance – 30h
a.a. 2018/19
- Informatica generale – degree in Economics and business administration – 30h
a.a. 2017/18
Lab
http://bimib.disco.unimib.it
http://www.istitutotumori.mi.it/
Projects and collaborations
Sysbio
ITFoC
PRiMaTE
Contacts
d.maspero@campus.unimib.it
+39 02 6448 7918
Room 1002 – Bimib
Edificio U14
Viale Sarca 336
Milano
Research Gate
BOA
DBLP